phylox.constants

This module contains some constants used throughout the package.

Module Attributes

LABEL_ATTR	The node attribute used to store the label of a node.
LENGTH_ATTR	The edge attribute used to store the length of an edge.
PROBABILITY_ATTR	The edge attribute used to store the inheritance probability along an edge.
RETIC_PREFIX	Prefix for the node name of a reticulation node when parsing a phylogenetic network from newick
MUVECTOR_ATTR	The node attribute used to store the mu-vector of a node

phylox.constants.LABEL_ATTR = 'label'

The node attribute used to store the label of a node.

phylox.constants.LENGTH_ATTR = 'length'

The edge attribute used to store the length of an edge.

phylox.constants.PROBABILITY_ATTR = 'probability'

The edge attribute used to store the inheritance probability along an edge.

phylox.constants.RETIC_PREFIX = '__#R'

Prefix for the node name of a reticulation node when parsing a phylogenetic network from newick

phylox.constants.MUVECTOR_ATTR = 'mu-vector'

The node attribute used to store the mu-vector of a node